PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009627678.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 260aa    MW: 30231.4 Da    PI: 6.1777
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009627678.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM74.13.4e-23171453128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     +++rFhPt+ el+ ++Lk+ ++g++l+ e   ++ +diy    Pw++  ++ + eek +yfF++ +k++++ +r +r+ ++g+Wk +    ++++
  XP_009627678.1  17 MCVRFHPTEAELI-NFLKRFLKGEPLPSECPnFQLADIYGDqPPWEIFgASDHPEEKVCYFFTRLKKQKSEHTRVRRTCANGTWKGQTGIDPIKN 110
                     579**********.9**********88755559999***87368***733333466788**************************888889**** PP

             NAM  95 kkgelvglkktLvfykgrapkgektd.Wvmheyrl 128
                      kg++vg ++ + f + r+++ge+ + W+m+ey++
  XP_009627678.1 111 GKGTVVGFRRCFKFQTSRSKEGEHNKiWLMKEYSV 145
                     9**************999999986544******86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-263167IPR003441NAC domain
PROSITE profilePS5100525.3415168IPR003441NAC domain
PfamPF023651.0E-1419145IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MTIYTMSTLH VRRGCIMCVR FHPTEAELIN FLKRFLKGEP LPSECPNFQL ADIYGDQPPW  60
EIFGASDHPE EKVCYFFTRL KKQKSEHTRV RRTCANGTWK GQTGIDPIKN GKGTVVGFRR  120
CFKFQTSRSK EGEHNKIWLM KEYSVGDDFF RKNNIPKEDI AVCRIKKNIR GEKNHGVTME  180
EQDVAKIIEA MLHEPDEDYC ITVQPAPICH AEHQVMDETQ KMNEHNNSSY INDCSNYQEE  240
INWADDVLLD IDDFVDIICC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532600.0EU753260.1 Nicotiana tabacum NAC transcription factor (NAC3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009627678.10.0PREDICTED: protein SOMBRERO-like
TrEMBLB3VK721e-144B3VK72_TOBAC; NAC transcription factor
STRINGPGSC0003DMT4000975962e-60(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-17NAC domain containing protein 2